BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB002E07LP1|AL424977
(994 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1038 1902 0.0
>3x_Contig1038
Length = 5718
Score = 1902 bits (957), Expect = 0.0
Identities = 983/994 (98%), Gaps = 1/994 (0%)
Strand = Plus / Minus
Query: 1 gatctctcctgtacactttatgtgctatgattttatcacacgcttcgtgtgataaaagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4585 gatctctcctgtacactttatgtgctatgattttatcacacgcttcgtgtgataaaagct 4526
Query: 61 tttcaaatatcgagctgtacttgtcaatacaaacccatgaganaaatccttcgaaacttg 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4525 tttcaaatatcgagctgtacttgtcaatacaaacccatgagataaatccttcgaaacttg 4466
Query: 121 acagttcagggaatcctggtagctttctrtcttctgtaaccgggtctgggttttcttcta 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 4465 acagttcagggaatcctggtagctttctgtcttctgtaaccgggtctgggttttcttcta 4406
Query: 181 tccctagaatgcagtnatcatgaaaccagtcctcattgcactccaagccaaggacgcatt 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4405 tccctagaatgcagtgatcatgaaaccagtcctcattgcactccaagccaaggacgcatt 4346
Query: 241 gtaacatcgttgtcgttgtattcgggtcatactctctatggcaagagcaaaataaccctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4345 gtaacatcgttgtcgttgtattcgggtcatactctctatggcaagagcaaaataaccctt 4286
Query: 301 tgaaattctggccatacctgttactcatgtctggtatatctggtgtagtattctttctta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4285 tgaaattctggccatacctgttactcatgtctggtatatctggtgtagtattctttctta 4226
Query: 361 tattacaaggtgtgaacttctcaccgtgttcaaactgcctttctgtaccgcaatcgcaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4225 tattacaaggtgtgaacttctcaccgtgttcaaactgcctttctgtaccgcaatcgcaac 4166
Query: 421 tgaaattcctcttatcgaaaagttccaccaagtcacaggtactgtganaactgaatagag 480
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 4165 tgaaattcctcttatcgaaaagttccaccaagtcacaggtactgtgaca-ctgaatagag 4107
Query: 481 catgaatagcacactcctatactgttgcaagtacgacatgcgaatattggctgtcgaatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4106 catgaatagcacactcctatactgttgcaagtacgacatgcgaatattggctgtcgaatt 4047
Query: 541 gggcccatggaataagtgcaatggcttggatcatatggcatcagtttatttgcttcatct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4046 gggcccatggaataagtgcaatggcttggatcatatggcatcagtttatttgcttcatct 3987
Query: 601 tccagttcctcctgtcgcttcacatattctttaacgctaatctcgctcattccctaacac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3986 tccagttcctcctgtcgcttcacatattctttaacgctaatctcgctcattccctaacac 3927
Query: 661 caacaagactatctttaagtgccagaactcaccttgtagtaagaaatgcgtgaattaagg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 3926 caacaagactatctttaagtgccagaactcaccttgtagtaagaaatgcgtgaatgaagg 3867
Query: 721 taccctttttgcctttaacttgacgtgttccttatgtttaaatttggggatatttcattg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3866 taccctttttgcctttaacttgacgtgttccttatgtttaaatttggggatatttcattg 3807
Query: 781 atagtwagagattttccatgtcgatgaatcaatattccgtatgattttacgtcaatatcg 840
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3806 atagtaagagattttccatgtcgatgaatcaatattccgtatgattttacgtcaatatcg 3747
Query: 841 acacatttggacggttaccggatggaaatcgatctaatatkgggcacaaaatgcatcaca 900
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 3746 acacatttggacggttaccggatggaaatcgatctaatatggggcacaaaatgcatcaca 3687
Query: 901 tcattccagagcttcaacatccatactttacctgcaattgtgttgcttcatcgtgtgaat 960
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 3686 tcattccagagcttcaacatccatactttacctgcaattgtgttgcttcatcgtgtgatt 3627
Query: 961 ggagcaataagtacggkttttaagcgtatgatcc 994
||||| |||||||||| |||||||||||||||||
Sbjct: 3626 ggagctataagtacggtttttaagcgtatgatcc 3593
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5723
Number of Sequences: 1807
Number of extensions: 5723
Number of successful extensions: 31
Number of sequences better than 1.0e-20: 1
length of query: 994
length of database: 10,358,551
effective HSP length: 16
effective length of query: 978
effective length of database: 10,329,639
effective search space: 10102386942
effective search space used: 10102386942
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)